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It doesn't go through every post. It uses a single UPDATE query using CASE on an existing index. What version of MySQL are you running?
And no, that was the last operation in step 2. It was updating your articles where the latest revision hadn't been applied to the current version.
Did you move on to the next step, and install the plugins, language, etc?
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I couldn't do anything else. The post table was marked as crashed and had to be repaired. Aftward the text on posts dated 2007 or older were completely deleted. I will try to restore the database this evening.
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If you are going to try again, redownload the ZIP. We tried to re-optimize some of these queries.